A program to symmetrize a group of atoms within a given tolerance.
Written by Tullio Pilati and Alessandra Forni.
It is incorporated into the WinGXpackage.
- The Download Site of SymMol is: www.ccp14.ac.uk/ccp/web-mirrors/symmol/~pila/
- Manual Page
- Fortran Source Code
- Zipped File (containing the source code, the manual, and example files)
Graphic Applications |
- ORTEP III
The Oak Ridge Thermal Ellipsoid Plot (ORTEP) program is a computer program, written in Fortran, for drawing crystal structure illustrations. Ball-and-stick type illustrations of a quality suitable for publication are produced with either spheres or thermal-motion probability ellipsoids, derived from anisotropic temperature factor parameters, on the atomic sites. The program also produces stereoscopic pairs of illustrations which aid in the visualization of complex arrangements of atoms and their correlated thermal motion patterns. - RasMol
A Molecular Graphics Visualisation Tool.
RasMol is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules. The program is aimed at display, teaching and generation of publication quality images.
Currently supported input file formats include Brookhaven Protein Databank (PDB), Tripos' Alchemy and Sybyl Mol2 formats, Molecular Design Limited's (MDL) Mol file format, Minnesota Supercomputer Center's (MSC) XMol XYZ format and CHARMm format files.
Written by Roger Sayle (BioMolecular Structures Group, Glaxo Research & Development, Greenford, Middlesex, UK) - The Home Page for RasMol and OpenRasMol is: www.openrasmol.org
- Xmgr
ACE/gr is a 2D plotting tool for X Window System. It uses an OSF Motif-based user interface, which is the reason why it's also known as Xmgr.
A major part of ACE/gr was written by Paul Turner who, unfortunately, does not have time to continue the development. Since the version 4.00beta, ACE/gr has being developed by a voluntary group of people.
- The Official Home of Xmgr
- The FTP home of ACE/gr is: ftp://plasma-gate.weizmann.ac.il/pub/xmgr4/
Graphic Libraries |
- PGPLOT Graphics Subroutine Library
The PGPLOT Graphics Subroutine Library is a Fortran- or C-callable, device-independent graphics package for making simple scientific graphs. It is intended for making graphical images of publication quality with minimum effort on the part of the user. For most applications, the program can be device-independent, and the output can be directed to the appropriate device at run time.
Written by T.J. Pearson at California Institute of Technology. - BUTTON: graphic buttons with
PGPLOT
A library of subroutines to create interactive FORTRAN programs using graphic buttons.
Contributed by N. Cardiel at the Departamento de Astrofísica of the Universidad Complutense de Madrid. - PGXTAL: 3D plotting routines for use with
PGPLOT
Contributed by Devinder S. Sivia
Interpreters/Viewers |
- Ghostscript
A Postscript interpreter/previewer. - Ghostview
A Postscript-document viewer using Ghostscript. - hpgl2ps
A HP (Hewlet Packard) plot command filter to PostScript.
Written by Don McCormick. - XPaint
A color image editing tool. - About XPaint
- The download site of XPaint is: sourceforge.net/projects/sf-xpaint/
- XV
Interactive Image Display for the X Window System.
Written by John Bradley.
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